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Sample GSM384164 Query DataSets for GSM384164
Status Public on Mar 20, 2009
Title mSAGE_Bladder_normal_TS22_MMD_SM041
Sample type SAGE
Anchor NlaIII
Tag Count 150151
Tag Length 10
 
Source name bladder, normal, microscope dissected, extracted short sage, ts22, mid-gestation embryo, atlas
Organism Mus musculus
Characteristics organ/tissue: bladder
tissue preparation: microscope dissected
age: TS22
sex: unknown
Biomaterial provider Cheryl Helgason Lab
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1225
Library_producer: Jas Khattra, Gene Expression Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL11
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311 Cancer Genome Anatomy Project (CGAP) Mouse SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 212 1411.91
AAAAAAAAAC 1 6.66
AAAAAAAAAG 2 13.32
AAAAAAAAAT 31 206.46
AAAAAAAACA 1 6.66
AAAAAAAAGG 1 6.66
AAAAAAAATA 7 46.62
AAAAAAAATG 2 13.32
AAAAAAACTA 4 26.64
AAAAAAACTT 1 6.66
AAAAAAAGAA 1 6.66
AAAAAAATAA 5 33.30
AAAAAAATAG 6 39.96
AAAAAAATCT 1 6.66
AAAAAAATTC 1 6.66
AAAAAACAAA 1 6.66
AAAAAACACA 1 6.66
AAAAAACCAG 3 19.98
AAAAAACGAA 1 6.66
AAAAAACTAC 1 6.66

Total number of rows: 33606

Table truncated, full table size 607 Kbytes.




Supplementary data files not provided

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