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Status
Public on Mar 20, 2009
Title
mSAGE_Brain_normal_P27_MMD_SM029
Sample type
SAGE
Anchor
NlaIII
Tag Count
115753
Tag Length
10
Source name
brain, visual cortex, normal, microscope dissected, 27 days post natal, male, extracted short sage, atlas
Organism
Mus musculus
Characteristics
organ/tissue: brain tissue preparation: microscope dissected age: post natal day 27 sex: male
Biomaterial provider
Elizabeth Simpson Lab
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 1268 Library_producer: Jas Khattra, Gene Expression Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
135
1166.28
AAAAAAAAAC
4
34.56
AAAAAAAAAG
1
8.64
AAAAAAAAAT
6
51.83
AAAAAAAATG
3
25.92
AAAAAAAATT
1
8.64
AAAAAAACTA
1
8.64
AAAAAAAGAC
2
17.28
AAAAAAATAA
11
95.03
AAAAAAATAG
2
17.28
AAAAAACACA
8
69.11
AAAAAACTAC
1
8.64
AAAAAAGTAC
1
8.64
AAAAAAGTCT
2
17.28
AAAAAATAAA
6
51.83
AAAAAATAAT
1
8.64
AAAAAATATC
2
17.28
AAAAAATCAT
1
8.64
AAAAAATCCC
1
8.64
AAAAAATTGA
9
77.75
Total number of rows: 31008 Table truncated, full table size 559 Kbytes .Supplementary data files not provided