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Status |
Public on Mar 20, 2009 |
Title |
mSAGE_Brain_normal_P84-P90_LCM_SM182 |
Sample type |
SAGE |
Anchor |
NlaIII
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Tag Count |
107335 |
Tag Length |
10 |
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Source name |
brain, cerebellum, white matter, normal, laser capture microdissected, extracted short sage, 84 days post natal
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Organism |
Mus musculus |
Characteristics |
organ/tissue: brain tissue preparation: laser capture microdissected age: P84 sex: unknown
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Biomaterial provider |
Elizabeth Simpson Lab
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Extracted molecule |
total RNA |
Extraction protocol |
N/A
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Description |
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 1763 Library_producer: David Charest Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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Submission date |
Mar 19, 2009 |
Last update date |
Mar 20, 2009 |
Contact name |
Cancer Genome Anatomy Project CGAP |
E-mail(s) |
cgapbs-r@mail.nih.gov
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Phone |
301-496-1550
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URL |
http://cgap.nci.nih.gov/
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Organization name |
National Cancer Institute
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Department |
Cancer Genome Anatomy Project
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Street address |
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City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20852 |
Country |
USA |
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Platform ID |
GPL11 |
Series (2) |
GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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Data table header descriptions |
TAG |
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COUNT |
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TPM |
tags per million |
Data table |
TAG |
COUNT |
TPM |
AAAAAAAAAA |
209 |
1947.17 |
AAAAAAAAAG |
1 |
9.32 |
AAAAAAAAGA |
1 |
9.32 |
AAAAAAACAA |
1 |
9.32 |
AAAAAAACTA |
1 |
9.32 |
AAAAAAATAA |
6 |
55.90 |
AAAAAAATAG |
1 |
9.32 |
AAAAAACAAA |
1 |
9.32 |
AAAAAACTGT |
1 |
9.32 |
AAAAAACTTC |
1 |
9.32 |
AAAAAAGAAA |
1 |
9.32 |
AAAAAAGACG |
1 |
9.32 |
AAAAAAGCAA |
1 |
9.32 |
AAAAAAGGAT |
1 |
9.32 |
AAAAAATAAA |
3 |
27.95 |
AAAAAATCAC |
1 |
9.32 |
AAAAAATTGG |
1 |
9.32 |
AAAAAATTTT |
1 |
9.32 |
AAAAACAAAA |
4 |
37.27 |
AAAAACAAGC |
1 |
9.32 |
Total number of rows: 22693
Table truncated, full table size 408 Kbytes.
Supplementary data files not provided |
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