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| Status |
Public on Mar 20, 2009 |
| Title |
mSAGE_Brain_normal_TS23_MMD_SM179 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
108071 |
| Tag Length |
10 |
| |
|
| Source name |
brain, normal, microscope dissected, extracted short sage, sagelite, late gestation embryo, ts23
|
| Organism |
Mus musculus |
| Characteristics |
organ/tissue: brain
tissue preparation: microscope dissected
age: E15.5/TS23
sex: unknown
|
| Biomaterial provider |
Elizabeth Simpson Lab
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
|
| |
|
| Description |
Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1760
Library_producer: David Charest Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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| |
|
| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
|
| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
|
| Platform ID |
GPL11 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
129 |
1193.66 |
| AAAAAAAAAC |
3 |
27.76 |
| AAAAAAAAAG |
2 |
18.51 |
| AAAAAAAAAT |
1 |
9.25 |
| AAAAAAAACA |
1 |
9.25 |
| AAAAAAAAGA |
1 |
9.25 |
| AAAAAAAAGC |
1 |
9.25 |
| AAAAAAACCA |
1 |
9.25 |
| AAAAAAAGAA |
2 |
18.51 |
| AAAAAAAGAC |
1 |
9.25 |
| AAAAAAAGAT |
1 |
9.25 |
| AAAAAAAGTT |
1 |
9.25 |
| AAAAAAATAA |
2 |
18.51 |
| AAAAAAATAC |
2 |
18.51 |
| AAAAAAATAG |
1 |
9.25 |
| AAAAAAATAT |
1 |
9.25 |
| AAAAAAATTA |
1 |
9.25 |
| AAAAAAATTT |
1 |
9.25 |
| AAAAAACCAA |
1 |
9.25 |
| AAAAAACTTT |
1 |
9.25 |
Total number of rows: 29334
Table truncated, full table size 527 Kbytes.
| Supplementary data files not provided |
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