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Sample GSM384236 Query DataSets for GSM384236
Status Public on Mar 20, 2009
Title mSAGE_Brain_normal_TS25_LCM_SM175
Sample type SAGE
Anchor NlaIII
Tag Count 105486
Tag Length 10
 
Source name brain, normal, laser capture microdissected, e17.5, ts19, male, extracted short sage
Organism Mus musculus
Characteristics organ/tissue: brain
tissue preparation: laser capture microdissected
age: E17.5
sex: male
cell type: normal
Biomaterial provider Elizabeth Simpson
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 2029
Library_producer: Gene Expresion Lab, GSC
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL11
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311 Cancer Genome Anatomy Project (CGAP) Mouse SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 219 2076.10
AAAAAAAAAC 2 18.96
AAAAAAAAAT 1 9.48
AAAAAAAACC 1 9.48
AAAAAAAACT 1 9.48
AAAAAAAAGT 1 9.48
AAAAAAAATC 2 18.96
AAAAAAACTT 1 9.48
AAAAAAAGAA 2 18.96
AAAAAAATAA 3 28.44
AAAAAAATAG 1 9.48
AAAAAAATGC 1 9.48
AAAAAACAGT 1 9.48
AAAAAACCAA 1 9.48
AAAAAACTCA 1 9.48
AAAAAAGAAA 6 56.88
AAAAAAGTGA 1 9.48
AAAAAATAAA 2 18.96
AAAAAATAGT 1 9.48
AAAAAATATA 1 9.48

Total number of rows: 26392

Table truncated, full table size 474 Kbytes.




Supplementary data files not provided

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