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Status
Public on Mar 20, 2009
Title
mSAGE_Brain_normal_TS25_LCM_SM175
Sample type
SAGE
Anchor
NlaIII
Tag Count
105486
Tag Length
10
Source name
brain, normal, laser capture microdissected, e17.5, ts19, male, extracted short sage
Organism
Mus musculus
Characteristics
organ/tissue: brain tissue preparation: laser capture microdissected age: E17.5 sex: male cell type: normal
Biomaterial provider
Elizabeth Simpson
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 2029 Library_producer: Gene Expresion Lab, GSC Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
219
2076.10
AAAAAAAAAC
2
18.96
AAAAAAAAAT
1
9.48
AAAAAAAACC
1
9.48
AAAAAAAACT
1
9.48
AAAAAAAAGT
1
9.48
AAAAAAAATC
2
18.96
AAAAAAACTT
1
9.48
AAAAAAAGAA
2
18.96
AAAAAAATAA
3
28.44
AAAAAAATAG
1
9.48
AAAAAAATGC
1
9.48
AAAAAACAGT
1
9.48
AAAAAACCAA
1
9.48
AAAAAACTCA
1
9.48
AAAAAAGAAA
6
56.88
AAAAAAGTGA
1
9.48
AAAAAATAAA
2
18.96
AAAAAATAGT
1
9.48
AAAAAATATA
1
9.48
Total number of rows: 26392 Table truncated, full table size 474 Kbytes .Supplementary data files not provided