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Status
Public on Mar 20, 2009
Title
mSAGE_Embryo_normal_TS11_MMD_SM099
Sample type
SAGE
Anchor
NlaIII
Tag Count
115947
Tag Length
10
Source name
extraembryonic tissue, normal, microscope dissected, ts10, extracted short sage, post implantation embryo, atlas
Organism
Mus musculus
Characteristics
organ/tissue: other tissue preparation: microscope dissected age: TS10 sex: unknown cell type: Whole embryo - extra-embryonic tissue
Biomaterial provider
Pamela Hoodless Lab
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 1423 Library_producer: Jas Khattra, Gene Expression Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
109
940.08
AAAAAAAAAG
1
8.62
AAAAAAAAAT
8
69.00
AAAAAAAACA
2
17.25
AAAAAAAAGA
1
8.62
AAAAAAAATA
1
8.62
AAAAAAAATG
1
8.62
AAAAAAACAT
1
8.62
AAAAAAACGG
1
8.62
AAAAAAACTA
1
8.62
AAAAAAAGAA
3
25.87
AAAAAAAGGA
1
8.62
AAAAAAAGTA
1
8.62
AAAAAAATAA
3
25.87
AAAAAAATAG
6
51.75
AAAAAAATGA
1
8.62
AAAAAAATTA
1
8.62
AAAAAACCAA
1
8.62
AAAAAACTCA
1
8.62
AAAAAAGACT
1
8.62
Total number of rows: 27306 Table truncated, full table size 491 Kbytes .Supplementary data files not provided