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| Status |
Public on Mar 20, 2009 |
| Title |
mSAGE_Embryo_normal_TS11_MMD_SM116 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
123162 |
| Tag Length |
10 |
| |
|
| Source name |
embryonic tissue, anterior, normal, microscope dissected, extracted short sage, ts11, post implantation embryo
|
| Organism |
Mus musculus |
| Characteristics |
organ/tissue: embryonic tissue
tissue preparation: microscope dissected
age: 7.5 dpc/TS11
sex: unknown
|
| Biomaterial provider |
Pamela Hoodless Lab
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
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| |
|
| Description |
Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1804
Library_producer: David Charest Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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| |
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| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
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| Platform ID |
GPL11 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
61 |
495.28 |
| AAAAAAAAAC |
1 |
8.12 |
| AAAAAAAAAT |
4 |
32.48 |
| AAAAAAAAGT |
1 |
8.12 |
| AAAAAAAATA |
1 |
8.12 |
| AAAAAAACTA |
2 |
16.24 |
| AAAAAAAGTA |
1 |
8.12 |
| AAAAAAAGTC |
1 |
8.12 |
| AAAAAAATAA |
4 |
32.48 |
| AAAAAAATAG |
2 |
16.24 |
| AAAAAAATGA |
1 |
8.12 |
| AAAAAAATTA |
1 |
8.12 |
| AAAAAACAAA |
1 |
8.12 |
| AAAAAACACA |
1 |
8.12 |
| AAAAAACGAA |
2 |
16.24 |
| AAAAAAGACA |
1 |
8.12 |
| AAAAAAGGAG |
1 |
8.12 |
| AAAAAATAAA |
6 |
48.72 |
| AAAAAATAGA |
1 |
8.12 |
| AAAAAATAGC |
2 |
16.24 |
Total number of rows: 30328
Table truncated, full table size 545 Kbytes.
| Supplementary data files not provided |
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