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Sample GSM384259 Query DataSets for GSM384259
Status Public on Mar 20, 2009
Title mSAGE_Embryonic_stem_cells_normal_MMD_SM208
Sample type SAGE
Anchor NlaIII
Tag Count 87182
Tag Length 10
 
Source name embryonic stem cell, normal, cell line, extracted short sage, sagelite
Organism Mus musculus
Characteristics organ/tissue: stem cell
tissue preparation: microscope dissected
age: cells
sex: unknown
Biomaterial provider Pamela Hoodless Lab
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1827
Library_producer: David Charest Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL11
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311 Cancer Genome Anatomy Project (CGAP) Mouse SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 133 1525.54
AAAAAAAAAG 2 22.94
AAAAAAAAAT 1 11.47
AAAAAAAACA 2 22.94
AAAAAAAACT 2 22.94
AAAAAAAATG 2 22.94
AAAAAAACTA 1 11.47
AAAAAAAGAA 2 22.94
AAAAAAAGTG 1 11.47
AAAAAAATAA 2 22.94
AAAAAAATAG 1 11.47
AAAAAAATGT 1 11.47
AAAAAAATTA 1 11.47
AAAAAAATTC 1 11.47
AAAAAACATA 1 11.47
AAAAAACCAA 1 11.47
AAAAAACCAG 1 11.47
AAAAAACCGA 1 11.47
AAAAAACTTT 1 11.47
AAAAAAGAAA 1 11.47

Total number of rows: 23425

Table truncated, full table size 437 Kbytes.




Supplementary data files not provided

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