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Status |
Public on Mar 20, 2009 |
Title |
mSAGE_Endoderm_normal_TS12_MMD_SM108 |
Sample type |
SAGE |
Anchor |
NlaIII
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Tag Count |
108579 |
Tag Length |
10 |
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Source name |
embryonic tissue, definitive endoderm, normal, microscope dissected, extracted short sage, ts12, mid-gestation embryo
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Organism |
Mus musculus |
Characteristics |
organ/tissue: embryonic tissue tissue preparation: microscope dissected age: 8.0 dpc/TS12 sex: unknown
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Biomaterial provider |
Pamela Hoodless Lab
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Extracted molecule |
total RNA |
Extraction protocol |
N/A
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Description |
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 1818 Library_producer: David Charest Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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Submission date |
Mar 19, 2009 |
Last update date |
Mar 20, 2009 |
Contact name |
Cancer Genome Anatomy Project CGAP |
E-mail(s) |
cgapbs-r@mail.nih.gov
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Phone |
301-496-1550
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URL |
http://cgap.nci.nih.gov/
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Organization name |
National Cancer Institute
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Department |
Cancer Genome Anatomy Project
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Street address |
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City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20852 |
Country |
USA |
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Platform ID |
GPL11 |
Series (2) |
GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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Data table header descriptions |
TAG |
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COUNT |
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TPM |
tags per million |
Data table |
TAG |
COUNT |
TPM |
AAAAAAAAAA |
196 |
1805.14 |
AAAAAAAAAG |
1 |
9.21 |
AAAAAAAAAT |
11 |
101.31 |
AAAAAAAAGA |
1 |
9.21 |
AAAAAAAAGT |
2 |
18.42 |
AAAAAAAATA |
2 |
18.42 |
AAAAAAAATT |
1 |
9.21 |
AAAAAAACAG |
1 |
9.21 |
AAAAAAACCA |
1 |
9.21 |
AAAAAAACTA |
4 |
36.84 |
AAAAAAAGAA |
3 |
27.63 |
AAAAAAAGCC |
1 |
9.21 |
AAAAAAAGTA |
1 |
9.21 |
AAAAAAATAA |
2 |
18.42 |
AAAAAAATAC |
1 |
9.21 |
AAAAAAATAG |
2 |
18.42 |
AAAAAAATCA |
2 |
18.42 |
AAAAAAATGT |
1 |
9.21 |
AAAAAACAAA |
1 |
9.21 |
AAAAAACACA |
1 |
9.21 |
Total number of rows: 28946
Table truncated, full table size 521 Kbytes.
Supplementary data files not provided |
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