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Status
Public on Mar 20, 2009
Title
mSAGE_Endoderm_normal_TS13_MMD_SM112
Sample type
SAGE
Anchor
NlaIII
Tag Count
110529
Tag Length
10
Source name
embryonic tissue, normal, microscope dissected, endoderm, hindgut, ts13, mid-gestation embryo, extracted short sage
Organism
Mus musculus
Characteristics
organ/tissue: embryonic tissue tissue preparation: microscope dissected age: TS13 sex: unknown
Biomaterial provider
Pamela Hoodless Lab
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 1504 Library_producer: Jas Khattra, Gene Expression Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
59
533.80
AAAAAAAAAG
1
9.05
AAAAAAAAAT
16
144.76
AAAAAAAACA
1
9.05
AAAAAAAAGA
1
9.05
AAAAAAAAGT
1
9.05
AAAAAAAATA
2
18.09
AAAAAAAATC
1
9.05
AAAAAAAATG
2
18.09
AAAAAAAATT
1
9.05
AAAAAAACTA
1
9.05
AAAAAAACTG
1
9.05
AAAAAAAGTA
1
9.05
AAAAAAAGTG
1
9.05
AAAAAAATAA
1
9.05
AAAAAAATAG
4
36.19
AAAAAAATCA
1
9.05
AAAAAAATTA
2
18.09
AAAAAAATTT
1
9.05
AAAAAACATT
2
18.09
Total number of rows: 29960 Table truncated, full table size 539 Kbytes .Supplementary data files not provided