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Sample GSM384293 Query DataSets for GSM384293
Status Public on Mar 20, 2009
Title mSAGE_Large_intestine_normal_TS20_MMD_SM155
Sample type SAGE
Anchor NlaIII
Tag Count 71136
Tag Length 10
 
Source name large_intestine, tissues, normal, microscope dissected, e12, ts20, unknown, extracted short sage
Organism Mus musculus
Characteristics organ/tissue: tissues
tissue preparation: microscope dissected
age: E12
sex: unknown
cell type: normal
Biomaterial provider Pamela Hoodless
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 2006
Library_producer: Gene Expresion Lab, GSC
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL11
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311 Cancer Genome Anatomy Project (CGAP) Mouse SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAT 2 28.12
AAAAAAAATA 1 14.06
AAAAAAAATG 1 14.06
AAAAAAACAG 1 14.06
AAAAAAACTA 1 14.06
AAAAAAAGCA 1 14.06
AAAAAAATAA 2 28.12
AAAAAAATAT 1 14.06
AAAAAACCAG 1 14.06
AAAAAACTTT 1 14.06
AAAAAAGCTA 1 14.06
AAAAAATAAA 1 14.06
AAAAAATAAT 1 14.06
AAAAAATATC 4 56.23
AAAAAATTCA 1 14.06
AAAAAATTTG 1 14.06
AAAAAATTTT 1 14.06
AAAAACAAGT 2 28.12
AAAAACAATC 12 168.69
AAAAACAATT 1 14.06

Total number of rows: 17048

Table truncated, full table size 318 Kbytes.




Supplementary data files not provided

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