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| Status |
Public on Mar 20, 2009 |
| Title |
mSAGE_Ovaries_normal_P0_MMD_SM164 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
114544 |
| Tag Length |
10 |
| |
|
| Source name |
ovary, normal, microscope dissected, extracted short sage, female, ts27
|
| Organism |
Mus musculus |
| Characteristics |
organ/tissue: ovary
tissue preparation: microscope dissected
age: P0 /TS27
sex: female
|
| Biomaterial provider |
Cheryl Helgason Lab
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
|
| |
|
| Description |
Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1741
Library_producer: David Charest Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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| |
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| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
|
| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
| |
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| Platform ID |
GPL11 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
115 |
1003.98 |
| AAAAAAAAAC |
1 |
8.73 |
| AAAAAAAAAG |
2 |
17.46 |
| AAAAAAAAAT |
4 |
34.92 |
| AAAAAAAACC |
1 |
8.73 |
| AAAAAAAAGA |
2 |
17.46 |
| AAAAAAAAGT |
1 |
8.73 |
| AAAAAAAATA |
2 |
17.46 |
| AAAAAAAATC |
1 |
8.73 |
| AAAAAAAATG |
1 |
8.73 |
| AAAAAAACAA |
4 |
34.92 |
| AAAAAAACTA |
4 |
34.92 |
| AAAAAAAGTT |
1 |
8.73 |
| AAAAAAATAA |
8 |
69.84 |
| AAAAAAATAG |
4 |
34.92 |
| AAAAAAATGG |
1 |
8.73 |
| AAAAAACAAA |
2 |
17.46 |
| AAAAAACATT |
1 |
8.73 |
| AAAAAACCAG |
1 |
8.73 |
| AAAAAAGAAA |
2 |
17.46 |
Total number of rows: 27502
Table truncated, full table size 495 Kbytes.
| Supplementary data files not provided |
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