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Status
Public on Mar 20, 2009
Title
mSAGE_Pancreas_normal_TS22_MMD_SM223
Sample type
SAGE
Anchor
NlaIII
Tag Count
98145
Tag Length
10
Source name
pancreas, normal, mocroscope dissected, e14.5, ts16, extracted short sage
Organism
Mus musculus
Characteristics
organ/tissue: pancreas tissue preparation: microscope dissected age: E14.5 sex: unknown cell type: normal mutations: WT Tle6
Biomaterial provider
Cheryl Helgason
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 2062 Library_producer: Gene Expresion Lab, GSC Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
3
30.57
AAAAAAAAAT
3
30.57
AAAAAAAACT
1
10.19
AAAAAAAAGT
1
10.19
AAAAAAAATA
2
20.38
AAAAAAAATC
1
10.19
AAAAAAACTA
7
71.32
AAAAAAACTC
1
10.19
AAAAAAAGTG
1
10.19
AAAAAAATAA
5
50.95
AAAAAAATAC
1
10.19
AAAAAAATCA
3
30.57
AAAAAAATTA
1
10.19
AAAAAACAGG
1
10.19
AAAAAACATA
1
10.19
AAAAAACATC
1
10.19
AAAAAACCAA
2
20.38
AAAAAACTAA
1
10.19
AAAAAATAAA
1
10.19
AAAAAATCAT
1
10.19
Total number of rows: 16633 Table truncated, full table size 311 Kbytes .Supplementary data files not provided