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Status
Public on Mar 20, 2009
Title
mSAGE_Placenta_normal_TS11_MMD_SM063
Sample type
SAGE
Anchor
NlaIII
Tag Count
103970
Tag Length
10
Source name
ectoplacental cone, normal, microscope dissected, extracted short sage, post implantation embryo, ts10, atlas
Organism
Mus musculus
Characteristics
organ/tissue: other tissue preparation: microscope dissected age: TS10 sex: unknown cell type: Embryo - ectoplacental cone
Biomaterial provider
Pamela Hoodless Lab
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 1248 Library_producer: Jas Khattra, Gene Expression Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
64
615.56
AAAAAAAAAT
4
38.47
AAAAAAAAGA
1
9.62
AAAAAAAAGT
1
9.62
AAAAAAAGAA
1
9.62
AAAAAAATAA
3
28.85
AAAAAAATAG
5
48.09
AAAAAAATTT
1
9.62
AAAAAACCAA
1
9.62
AAAAAAGTAG
1
9.62
AAAAAATAAA
18
173.13
AAAAAATAGC
2
19.24
AAAAAATGAG
1
9.62
AAAAAATGGA
1
9.62
AAAAAATGGC
1
9.62
AAAAAATGTG
1
9.62
AAAAACAAGT
2
19.24
AAAAACAATC
8
76.95
AAAAACAATT
2
19.24
AAAAACAGGT
1
9.62
Total number of rows: 22614 Table truncated, full table size 407 Kbytes .Supplementary data files not provided