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Sample GSM384353 Query DataSets for GSM384353
Status Public on Mar 20, 2009
Title mSAGE_Placenta_normal_TS11_MMD_SM063
Sample type SAGE
Anchor NlaIII
Tag Count 103970
Tag Length 10
 
Source name ectoplacental cone, normal, microscope dissected, extracted short sage, post implantation embryo, ts10, atlas
Organism Mus musculus
Characteristics organ/tissue: other
tissue preparation: microscope dissected
age: TS10
sex: unknown
cell type: Embryo - ectoplacental cone
Biomaterial provider Pamela Hoodless Lab
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1248
Library_producer: Jas Khattra, Gene Expression Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL11
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311 Cancer Genome Anatomy Project (CGAP) Mouse SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 64 615.56
AAAAAAAAAT 4 38.47
AAAAAAAAGA 1 9.62
AAAAAAAAGT 1 9.62
AAAAAAAGAA 1 9.62
AAAAAAATAA 3 28.85
AAAAAAATAG 5 48.09
AAAAAAATTT 1 9.62
AAAAAACCAA 1 9.62
AAAAAAGTAG 1 9.62
AAAAAATAAA 18 173.13
AAAAAATAGC 2 19.24
AAAAAATGAG 1 9.62
AAAAAATGGA 1 9.62
AAAAAATGGC 1 9.62
AAAAAATGTG 1 9.62
AAAAACAAGT 2 19.24
AAAAACAATC 8 76.95
AAAAACAATT 2 19.24
AAAAACAGGT 1 9.62

Total number of rows: 22614

Table truncated, full table size 407 Kbytes.




Supplementary data files not provided

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