NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM384358 Query DataSets for GSM384358
Status Public on Mar 20, 2009
Title mSAGE_Prostate_normal_P63_MMD_SM220
Sample type SAGE
Anchor NlaIII
Tag Count 68526
Tag Length 10
 
Source name prostate, normal, mocroscope dissected, p63, male, extracted short sage
Organism Mus musculus
Characteristics organ/tissue: prostate
tissue preparation: microscope dissected
age: P63
sex: male
cell type: normal
mutations: Pten +/-
Biomaterial provider Cheryl Helgason
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 2056
Library_producer: Gene Expresion Lab, GSC
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL11
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311 Cancer Genome Anatomy Project (CGAP) Mouse SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 17 248.08
AAAAAAAAAT 12 175.12
AAAAAAAACT 1 14.59
AAAAAAAAGA 1 14.59
AAAAAAAATG 2 29.19
AAAAAAACAT 1 14.59
AAAAAAAGAA 2 29.19
AAAAAAAGCA 1 14.59
AAAAAAAGCC 1 14.59
AAAAAAATAA 1 14.59
AAAAAACTCT 1 14.59
AAAAAAGAAA 1 14.59
AAAAAAGGGA 1 14.59
AAAAAAGGTC 1 14.59
AAAAAAGTAC 1 14.59
AAAAAATAAA 7 102.15
AAAAAATAAC 1 14.59
AAAAAATCAT 1 14.59
AAAAAATGGA 1 14.59
AAAAAATTCT 3 43.78

Total number of rows: 17424

Table truncated, full table size 325 Kbytes.




Supplementary data files not provided

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap