GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
mSAGE_Retina_normal_2.5 d_B_52
Sample type
SAGE
Anchor
NlaIII
Tag Count
56177
Tag Length
10
Source name
retina, bulk, normal, female, male, short sage, 2.5 days post natal, c57bl/6
Organism
Mus musculus
Characteristics
organ/tissue: retina tissue preparation: bulk age: Postnatal day 2.5 sex: male and female mutations: Wildtype other information: Postnatal 2.5 whole retina (consists of a number of individuals of different sexes). Strain=C57BL/6.
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: BsmF I CGAP_Numeric_library_ID: 929 Laboratory: Seth Blackshaw, Department of Genetics, Harvard Medical School and Howard Hughes Medical Institute
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
187
3328.76
AAAAAAAAAC
3
53.40
AAAAAAAAAG
2
35.60
AAAAAAAAAT
2
35.60
AAAAAAAAGA
2
35.60
AAAAAAAAGT
1
17.80
AAAAAAAATT
1
17.80
AAAAAAACCC
1
17.80
AAAAAAACTA
1
17.80
AAAAAAAGAA
4
71.20
AAAAAAATAA
1
17.80
AAAAAAATAC
1
17.80
AAAAAAATAG
7
124.61
AAAAAAATAT
1
17.80
AAAAAAATTA
1
17.80
AAAAAAATTG
1
17.80
AAAAAACACA
2
35.60
AAAAAACACT
1
17.80
AAAAAAGAAA
2
35.60
AAAAAAGGAG
1
17.80
Total number of rows: 20805 Table truncated, full table size 388 Kbytes .Supplementary data files not provided