GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
mSAGE_Small_intestine_normal_TS20_MMD_SM159
Sample type
SAGE
Anchor
NlaIII
Tag Count
51511
Tag Length
10
Source name
small_intestine, tissues, normal, microscope dissected, e12, unknown, extracted short sage
Organism
Mus musculus
Characteristics
organ/tissue: tissues tissue preparation: microscope dissected age: E12 sex: unknown cell type: normal
Biomaterial provider
Pamela Hoodless
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 2008 Library_producer: Gene Expresion Lab, GSC Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
7
135.89
AAAAAAAAAT
5
97.07
AAAAAAAATG
1
19.41
AAAAAAACCC
1
19.41
AAAAAAATAA
2
38.83
AAAAAAATAG
2
38.83
AAAAAACCAG
1
19.41
AAAAAACGAA
2
38.83
AAAAAACTTT
1
19.41
AAAAAAGCAA
1
19.41
AAAAAATAAA
10
194.13
AAAAAATAGA
1
19.41
AAAAAATAGC
1
19.41
AAAAAATATC
1
19.41
AAAAACAAAA
1
19.41
AAAAACAAGT
1
19.41
AAAAACAATC
2
38.83
AAAAACAATT
1
19.41
AAAAACATAT
4
77.65
AAAAACATCT
3
58.24
Total number of rows: 14021 Table truncated, full table size 262 Kbytes .Supplementary data files not provided