GEO help: Mouse over screen elements for information.
Status
Public on Mar 20, 2009
Title
mSAGE_Urogenital_sinus_normal_TS24_MMD_SM054
Sample type
SAGE
Anchor
NlaIII
Tag Count
114184
Tag Length
10
Source name
embryonic tissue, female urogenital sinus, normal, microscope dissected, extracted short sage, late gestation embryo, ts24, female, atlas
Organism
Mus musculus
Characteristics
organ/tissue: embryonic tissue tissue preparation: microscope dissected age: TS24 sex: female cell type: Urogenital sinus female
Biomaterial provider
Cheryl Helgason Lab
Extracted molecule
total RNA
Extraction protocol
N/A
Description
Tagging_enzyme: Mme I CGAP_Numeric_library_ID: 1235 Library_producer: Jas Khattra, Gene Expression Lab Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
Submission date
Mar 19, 2009
Last update date
Mar 20, 2009
Contact name
Cancer Genome Anatomy Project CGAP
E-mail(s)
cgapbs-r@mail.nih.gov
Phone
301-496-1550
URL
http://cgap.nci.nih.gov/
Organization name
National Cancer Institute
Department
Cancer Genome Anatomy Project
Street address
City
Bethesda
State/province
MD
ZIP/Postal code
20852
Country
USA
Platform ID
GPL11
Series (2)
GSE14
Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311
Cancer Genome Anatomy Project (CGAP) Mouse SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
Data table
TAG
COUNT
TPM
AAAAAAAAAA
87
761.93
AAAAAAAAAG
1
8.76
AAAAAAAAAT
21
183.91
AAAAAAAATA
3
26.27
AAAAAAAATG
3
26.27
AAAAAAACTA
2
17.52
AAAAAAACTC
1
8.76
AAAAAAAGAA
1
8.76
AAAAAAAGAC
1
8.76
AAAAAAATAA
15
131.37
AAAAAAATAG
5
43.79
AAAAAACAAA
1
8.76
AAAAAACACA
1
8.76
AAAAAAGAAC
1
8.76
AAAAAAGAAG
1
8.76
AAAAAAGAAT
2
17.52
AAAAAAGATT
1
8.76
AAAAAAGGCA
1
8.76
AAAAAAGTGA
1
8.76
AAAAAAGTTA
1
8.76
Total number of rows: 31004 Table truncated, full table size 558 Kbytes .Supplementary data files not provided