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| Status |
Public on Mar 20, 2009 |
| Title |
mSAGE_Urogenital_sinus_normal_TS24_MMD_SM163 |
| Sample type |
SAGE |
| Anchor |
NlaIII
|
| Tag Count |
131986 |
| Tag Length |
10 |
| |
|
| Source name |
embryonic tissue, female urogenital sinus epithelium, normal, microscope dissected, extracted short sage, female, ts24, late gestation embryo
|
| Organism |
Mus musculus |
| Characteristics |
organ/tissue: embryonic tissue
tissue preparation: microscope dissected
age: 16.5 dpc/TS24
sex: female
|
| Biomaterial provider |
Cheryl Helgason Lab
|
| Extracted molecule |
total RNA |
| Extraction protocol |
N/A
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| |
|
| Description |
Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 1740
Library_producer: David Charest Lab
Laboratory: Marco Marra, Genome Sciences Centre, Vancouver, BC
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| Submission date |
Mar 19, 2009 |
| Last update date |
Mar 20, 2009 |
| Contact name |
Cancer Genome Anatomy Project CGAP |
| E-mail(s) |
cgapbs-r@mail.nih.gov
|
| Phone |
301-496-1550
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| URL |
http://cgap.nci.nih.gov/
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| Organization name |
National Cancer Institute
|
| Department |
Cancer Genome Anatomy Project
|
| Street address |
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20852 |
| Country |
USA |
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| Platform ID |
GPL11 |
| Series (2) |
| GSE14 |
Cancer Genome Anatomy Project (CGAP) SAGE Libraries |
| GSE15311 |
Cancer Genome Anatomy Project (CGAP) Mouse SAGE |
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| Data table header descriptions |
| TAG |
|
| COUNT |
|
| TPM |
tags per million |
| Data table |
| TAG |
COUNT |
TPM |
| AAAAAAAAAA |
111 |
841.00 |
| AAAAAAAAAG |
1 |
7.58 |
| AAAAAAAAAT |
18 |
136.38 |
| AAAAAAAATG |
4 |
30.31 |
| AAAAAAACAA |
1 |
7.58 |
| AAAAAAACTA |
1 |
7.58 |
| AAAAAAATAA |
4 |
30.31 |
| AAAAAAATAG |
3 |
22.73 |
| AAAAAAATCA |
1 |
7.58 |
| AAAAAAATGA |
1 |
7.58 |
| AAAAAACCAA |
1 |
7.58 |
| AAAAAACTGT |
1 |
7.58 |
| AAAAAAGAAA |
1 |
7.58 |
| AAAAAAGCTT |
2 |
15.15 |
| AAAAAAGTCT |
1 |
7.58 |
| AAAAAATAAA |
25 |
189.41 |
| AAAAAATAGA |
1 |
7.58 |
| AAAAAATAGC |
4 |
30.31 |
| AAAAAATCAT |
1 |
7.58 |
| AAAAAATGGA |
2 |
15.15 |
Total number of rows: 29014
Table truncated, full table size 524 Kbytes.
| Supplementary data files not provided |
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