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Sample GSM384429 Query DataSets for GSM384429
Status Public on Mar 20, 2009
Title mSAGE_Vascular_endothelium_normal_liver_associated_AP_NLiEC1
Sample type SAGE
Anchor NlaIII
Tag Count 109218
Tag Length 10
 
Source name vascular, normal, endothelium, antibody purified, extracted short sage, adult
Organism Mus musculus
Characteristics organ/tissue: vascular
tissue preparation: antibody purified
sex: unknown
Extracted molecule total RNA
Extraction protocol N/A
 
Description Tagging_enzyme: Mme I
CGAP_Numeric_library_ID: 2197
Library_producer: Brad St. Croix
Laboratory: Brad St. Croix, National Cancer Institute, Tumor Angiogenesis Section
References: Seaman S et al. Cancer Cell. 2007 Jun;11(6):539-54 [PUBMED=17560335]
 
Submission date Mar 19, 2009
Last update date Mar 20, 2009
Contact name Cancer Genome Anatomy Project CGAP
E-mail(s) cgapbs-r@mail.nih.gov
Phone 301-496-1550
URL http://cgap.nci.nih.gov/
Organization name National Cancer Institute
Department Cancer Genome Anatomy Project
Street address
City Bethesda
State/province MD
ZIP/Postal code 20852
Country USA
 
Platform ID GPL11
Series (2)
GSE14 Cancer Genome Anatomy Project (CGAP) SAGE Libraries
GSE15311 Cancer Genome Anatomy Project (CGAP) Mouse SAGE

Data table header descriptions
TAG
COUNT
TPM tags per million

Data table
TAG COUNT TPM
AAAAAAAAAA 55 503.58
AAAAAAAAAC 1 9.16
AAAAAAAAAT 5 45.78
AAAAAAAAGG 1 9.16
AAAAAAAATA 1 9.16
AAAAAAAATT 1 9.16
AAAAAAACAT 1 9.16
AAAAAAACTA 1 9.16
AAAAAAAGAA 3 27.47
AAAAAAAGCT 1 9.16
AAAAAAATAA 4 36.62
AAAAAAATCT 1 9.16
AAAAAAATTT 1 9.16
AAAAAACACA 1 9.16
AAAAAACTAC 1 9.16
AAAAAAGAAA 1 9.16
AAAAAAGCAA 2 18.31
AAAAAAGCGT 1 9.16
AAAAAAGCTT 1 9.16
AAAAAAGTGT 1 9.16

Total number of rows: 33031

Table truncated, full table size 594 Kbytes.




Supplementary data files not provided

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