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GEO accession:
Sample GSM38890
Query DataSets for GSM38890
Status
Public on Jan 14, 2006
Title
SAGE_hypothalamus_intact female mice
Sample type
SAGE
Anchor
NlaIII
Tag Count
187547
Tag Length
10
Source name
hypothalamus
Organism
Mus musculus
Extracted molecule
total RNA
Description
Hypothalamus were dissected from C57BL6 female mice and pooled together. Total RNA was isolated by Trizol.
Keywords = hypothalamus
Keywords = SAGE
Submission date
Jan 13, 2005
Last update date
Nov 19, 2008
Contact name
Yuichiro Nishida
E-mail(s)
ynishida88@hotmail.com
Phone
(717) 531-1028
Fax
(717) 531-1792
Organization name
Penn State College of Medicine
Department
Department of Anatomy and Physiology
Lab
Dr. Ray's Lab
Street address
500 University Drive
City
Hershey
State/province
PA
ZIP/Postal code
17033
Country
USA
Platform ID
GPL11
Series (1)
GSE2156
Sexually dimorphic gene expression in the hypothalamus, pituitary gland and cortex by SAGE
Data table header descriptions
TAG
COUNT
TPM
tags per million
PERCENT
Data table
TAG
COUNT
TPM
PERCENT
ATGACTGATA
1128
6014.49
0.601449
AGCAGTCCCC
988
5268.01
0.526801
GTGGCTCACA
907
4836.12
0.483612
AGGACAAATA
901
4804.13
0.480413
CCTTTAATCC
828
4414.89
0.441489
CATCGCCAGT
760
4052.32
0.405232
GTGACCTGGC
760
4052.32
0.405232
AACGGCTAAA
583
3108.55
0.310855
GCTGCCCTCC
554
2953.93
0.295393
GCCTCCAAGG
548
2921.93
0.292193
TGGTTGCTGG
524
2793.97
0.279397
AGGCAGACAG
472
2516.70
0.25167
GGGGGAGTGG
454
2420.73
0.242073
GCTTCGTCCA
436
2324.75
0.232475
ATCAACACCG
430
2292.76
0.229276
GAGCGTTTTG
417
2223.44
0.222344
TTGGCAAGTC
375
1999.50
0.19995
GAACATTGCA
364
1940.85
0.194085
ATACTGACAT
350
1866.20
0.18662
ATCCTGGTAA
322
1716.90
0.17169
Total number of rows:
57914
Table truncated, full table size
1543 Kbytes
.
Supplementary data files not provided
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