|
Status |
Public on Aug 20, 2009 |
Title |
CD4-H4K16ac-HDACi-8h |
Sample type |
SRA |
|
|
Source name |
CD4+ T cell
|
Organism |
Homo sapiens |
Characteristics |
cell type: CD4+ T cell antibody: anti-H4K16ac Ab sirna: n/a treatment: Trichostatin + sodium butyrate for 8 hours
|
Treatment protocol |
Treatment protocol as described in Wang et al., 2009
|
Growth protocol |
Growth protocol as described in Wang et al., 2009
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Extract protocol as described in Wang et al., 2009
|
|
|
Library strategy |
ChIP-Seq |
Library source |
genomic |
Library selection |
ChIP |
Instrument model |
Illumina Genome Analyzer |
|
|
Description |
CD4 H4K16ac w/ TSA+Bu 8h ChIP-Seq, genomic DNA
|
Data processing |
Sequence reads were obtained and mapped to the human (March 2006, hg18) genomes using the Illumina Genome Analyzer Pipeline. More details as described in Wang et al., 2009
|
|
|
Submission date |
Apr 18, 2009 |
Last update date |
May 15, 2019 |
Contact name |
Chongzhi Zang |
Organization name |
University of Virginia
|
Street address |
P. O. Box 800717
|
City |
Charlottesville |
State/province |
VA |
ZIP/Postal code |
22908 |
Country |
USA |
|
|
Platform ID |
GPL9052 |
Series (1) |
GSE15735 |
Genome-wide mapping of HATs and HDACs in human CD4+ T cells |
|
Relations |
SRA |
SRX017716 |
BioSample |
SAMN00009891 |