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Sample GSM399917 Query DataSets for GSM399917
Status Public on Feb 08, 2012
Title 1F-Control 9%
Sample type RNA
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Female
age: 20wks
tissue: Liver
diet: Control 9%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 1
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
Platform ID GPL6885
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ILMN_2896528 1971.237
ILMN_2721178 421.6994
ILMN_3033922 656.3359
ILMN_3092673 4613.846
ILMN_2816356 28.5547
ILMN_2808939 1446.474
ILMN_2634564 342.7834
ILMN_2737647 6.918636
ILMN_2734484 763.3281
ILMN_2952292 44.21797
ILMN_2699078 -5.698454
ILMN_1213681 120.8495
ILMN_2735413 480.4886
ILMN_2735415 560.5526
ILMN_2891688 591.9026
ILMN_2637698 467.0146
ILMN_2674228 173.9081
ILMN_2601546 10.17436
ILMN_1230831 6.897439
ILMN_2848071 1248.599

Total number of rows: 25697

Table truncated, full table size 558 Kbytes.

Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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