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Sample GSM399918 Query DataSets for GSM399918
Status Public on Feb 08, 2012
Title 2F-Control 9%
Sample type RNA
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Female
age: 20wks
tissue: Liver
diet: Control 9%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 2
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
Platform ID GPL6885
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ILMN_2896528 2136.419
ILMN_2721178 419.9692
ILMN_3033922 1019.024
ILMN_3092673 4537.871
ILMN_2816356 34.38432
ILMN_2808939 1588.195
ILMN_2634564 275.1093
ILMN_2737647 11.6845
ILMN_2734484 762.4999
ILMN_2952292 51.32353
ILMN_2699078 -5.386219
ILMN_1213681 114.5481
ILMN_2735413 409.3896
ILMN_2735415 461.1263
ILMN_2891688 392.9983
ILMN_2637698 501.8773
ILMN_2674228 162.6463
ILMN_2601546 7.586763
ILMN_1230831 -2.785062
ILMN_2848071 1156.524

Total number of rows: 25697

Table truncated, full table size 558 Kbytes.

Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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