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Sample GSM399919 Query DataSets for GSM399919
Status Public on Feb 08, 2012
Title 3F-Control 9%
Sample type RNA
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Female
age: 20wks
tissue: Liver
diet: Control 9%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 3
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
Platform ID GPL6885
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ILMN_2896528 1886.206
ILMN_2721178 371.8542
ILMN_3033922 653.1525
ILMN_3092673 3943.127
ILMN_2816356 35.20204
ILMN_2808939 1427.284
ILMN_2634564 328.6074
ILMN_2737647 3.087366
ILMN_2734484 759.0944
ILMN_2952292 46.97821
ILMN_2699078 -10.50777
ILMN_1213681 93.15695
ILMN_2735413 470.8753
ILMN_2735415 629.5405
ILMN_2891688 693.4731
ILMN_2637698 537.3908
ILMN_2674228 149.9428
ILMN_2601546 8.053324
ILMN_1230831 4.981893
ILMN_2848071 1278.594

Total number of rows: 25697

Table truncated, full table size 558 Kbytes.

Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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