NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM399921 Query DataSets for GSM399921
Status Public on Feb 08, 2012
Title 5F-HighFat 9%
Sample type RNA
 
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Female
age: 20wks
tissue: Liver
diet: HighFat 9%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 1
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
 
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
E-mail(s) v.w.bloks@umcg.nl
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
 
Platform ID GPL6885
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
ID_REF
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ID_REF VALUE
ILMN_2896528 2098.106
ILMN_2721178 566.5401
ILMN_3033922 823.5562
ILMN_3092673 4355.283
ILMN_2816356 35.03731
ILMN_2808939 1343.713
ILMN_2634564 335.9235
ILMN_2737647 4.541267
ILMN_2734484 1024.554
ILMN_2952292 58.97901
ILMN_2699078 -8.474588
ILMN_1213681 120.9017
ILMN_2735413 478.0838
ILMN_2735415 611.3128
ILMN_2891688 547.2392
ILMN_2637698 490.2352
ILMN_2674228 176.9315
ILMN_2601546 11.10515
ILMN_1230831 -0.7091439
ILMN_2848071 1061.148

Total number of rows: 25697

Table truncated, full table size 558 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap