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Sample GSM399922 Query DataSets for GSM399922
Status Public on Feb 08, 2012
Title 6F-HighFat 9%
Sample type RNA
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Female
age: 20wks
tissue: Liver
diet: HighFat 9%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 2
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
Platform ID GPL6885
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ILMN_2896528 1491.829
ILMN_2721178 334.9153
ILMN_3033922 839.8809
ILMN_3092673 4355.283
ILMN_2816356 14.03302
ILMN_2808939 1436.171
ILMN_2634564 392.9983
ILMN_2737647 11.57475
ILMN_2734484 735.9872
ILMN_2952292 84.84498
ILMN_2699078 -3.504187
ILMN_1213681 169.4212
ILMN_2735413 567.7679
ILMN_2735415 627.9207
ILMN_2891688 525.29
ILMN_2637698 528.9266
ILMN_2674228 183.9513
ILMN_2601546 8.924571
ILMN_1230831 4.304659
ILMN_2848071 1204.952

Total number of rows: 25697

Table truncated, full table size 558 Kbytes.

Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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