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Sample GSM399925 Query DataSets for GSM399925
Status Public on Feb 08, 2012
Title 9F-Control18%
Sample type RNA
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Female
age: 20wks
tissue: Liver
diet: Control18%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 1
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
Platform ID GPL6885
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ILMN_2896528 1892.663
ILMN_2721178 393.618
ILMN_3033922 749.0226
ILMN_3092673 4248.208
ILMN_2816356 18.23207
ILMN_2808939 1744.199
ILMN_2634564 299.0003
ILMN_2737647 4.594198
ILMN_2734484 772.3912
ILMN_2952292 47.28387
ILMN_2699078 -6.641717
ILMN_1213681 112.7263
ILMN_2735413 543.4766
ILMN_2735415 588.0988
ILMN_2891688 556.0495
ILMN_2637698 485.0961
ILMN_2674228 158.1283
ILMN_2601546 8.595353
ILMN_1230831 9.516149
ILMN_2848071 1237.994

Total number of rows: 25697

Table truncated, full table size 558 Kbytes.

Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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