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Sample GSM399929 Query DataSets for GSM399929
Status Public on Feb 08, 2012
Title 13F-HighFat 18%
Sample type RNA
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Female
age: 20wks
tissue: Liver
diet: HighFat 18%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 1
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
Platform ID GPL6885
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ILMN_2896528 2102.921
ILMN_2721178 460.5696
ILMN_3033922 878.7831
ILMN_3092673 4679.31
ILMN_2816356 19.49621
ILMN_2808939 1434.626
ILMN_2634564 348.346
ILMN_2737647 1.345161
ILMN_2734484 716.6473
ILMN_2952292 50.43312
ILMN_2699078 -6.729028
ILMN_1213681 162.1701
ILMN_2735413 639.3043
ILMN_2735415 780.7169
ILMN_2891688 456.7291
ILMN_2637698 564.9474
ILMN_2674228 197.4558
ILMN_2601546 7.267047
ILMN_1230831 -1.16771
ILMN_2848071 1079.572

Total number of rows: 25697

Table truncated, full table size 558 Kbytes.

Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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