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Sample GSM399930 Query DataSets for GSM399930
Status Public on Feb 08, 2012
Title 14F-HighFat 18%
Sample type RNA
 
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Female
age: 20wks
tissue: Liver
diet: HighFat 18%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 2
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
 
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
E-mail(s) v.w.bloks@umcg.nl
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
 
Platform ID GPL6885
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
ID_REF
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ID_REF VALUE
ILMN_2896528 1311.195
ILMN_2721178 306.1861
ILMN_3033922 773.9065
ILMN_3092673 4248.208
ILMN_2816356 27.23708
ILMN_2808939 1726.304
ILMN_2634564 360.7424
ILMN_2737647 5.544552
ILMN_2734484 710.9893
ILMN_2952292 49.06388
ILMN_2699078 -7.720901
ILMN_1213681 121.6327
ILMN_2735413 783.1412
ILMN_2735415 801.1544
ILMN_2891688 413.354
ILMN_2637698 507.9305
ILMN_2674228 166.3538
ILMN_2601546 3.156775
ILMN_1230831 8.1389
ILMN_2848071 1183.429

Total number of rows: 25697

Table truncated, full table size 558 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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