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Sample GSM399932 Query DataSets for GSM399932
Status Public on Feb 08, 2012
Title 16F-HighFat 18%
Sample type RNA
 
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Female
age: 20wks
tissue: Liver
diet: HighFat 18%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 4
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
 
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
E-mail(s) v.w.bloks@umcg.nl
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
 
Platform ID GPL6885
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
ID_REF
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ID_REF VALUE
ILMN_2896528 1586.786
ILMN_2721178 347.6186
ILMN_3033922 766.5593
ILMN_3092673 4727.788
ILMN_2816356 33.35003
ILMN_2808939 2356.887
ILMN_2634564 319.9319
ILMN_2737647 0.2129199
ILMN_2734484 649.2019
ILMN_2952292 44.30488
ILMN_2699078 -8.366289
ILMN_1213681 109.2925
ILMN_2735413 680.7925
ILMN_2735415 764.5887
ILMN_2891688 569.9702
ILMN_2637698 493.339
ILMN_2674228 133.8017
ILMN_2601546 15.32541
ILMN_1230831 8.96917
ILMN_2848071 1184.314

Total number of rows: 25697

Table truncated, full table size 558 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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