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Sample GSM399947 Query DataSets for GSM399947
Status Public on Feb 08, 2012
Title 15M-HighFat 18%
Sample type RNA
 
Source name Liver
Organism Mus musculus
Characteristics strain: C57bl/6J OlaHsd
gender: Male
age: 20wks
tissue: Liver
diet: HighFat 18%
Treatment protocol Pregnant females were fed a control diet (18%) or a low protein diet 9% (90 g casein/kg) during the gestational period, offspring was placed after 6 wks on HF diet (36% SF) or a control diet for 14 wks.
Extracted molecule total RNA
Extraction protocol RNA was extracted with TriReagent (Sigma). Quality control was performed with Agilent Bioanalyzer.
Label Biotin
Label protocol Biotinylated cRNA were prepared with the Illumina TotalPrep RNA Amplification Kit (Applied Biosystems)
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Biological replicate 3
Data processing The data after background substraction were normalized using quantile normalization with BeadStudio Expression Module 3.2.7
 
Submission date May 04, 2009
Last update date Feb 09, 2012
Contact name vincent bloks
Organization name UMCG
Department Pediatrics
Lab Pediatrics
Street address Hanzeplein1
City Groningen
ZIP/Postal code 9713GZ
Country Netherlands
 
Platform ID GPL6103
Series (1)
GSE15940 Sex-Dependent Programming of Glucose and Fatty Acid Metabolism in Mouse Offspring by Maternal Protein Restriction

Data table header descriptions
ID_REF
VALUE BeadStudio (3.2.7) quantile normalized signal

Data table
ID_REF VALUE
ILMN_1212602 -6.340181
ILMN_1212605 64.38446
ILMN_1212607 12.71277
ILMN_1212612 20.04591
ILMN_1212616 7.313169
ILMN_1212619 -0.03763526
ILMN_1212626 12.69012
ILMN_1212628 -1.216505
ILMN_1212632 13.17609
ILMN_1212636 690.2291
ILMN_1212637 1897.57
ILMN_1212644 6.698377
ILMN_1212645 2421.623
ILMN_1212646 117.6264
ILMN_1212648 17.01846
ILMN_1212672 66.32732
ILMN_1212681 -10.42977
ILMN_1212682 2.122446
ILMN_1212683 -9.30405
ILMN_1212685 -2.396753

Total number of rows: 24613

Table truncated, full table size 535 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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