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Status
Public on Jan 27, 2006
Title
MGSKO, PR01M005v0
Sample type
RNA
Source name
Anterior tibialis
Organism
Mus musculus Extracted molecule
total RNA
Description
OrganismPart:Muscle;StrainOrLine:C57BL6/129SV; Anterior tibialis removed from 3-month old muscle glycogen synthase WT or knockout mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
proach@iupui.edu Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
1052.10000
P
0.00086
AFFX-BioB-M_at
1077.90000
P
0.00013
AFFX-BioB-3_at
383.90000
P
0.00360
AFFX-BioC-5_at
1715.80000
P
0.00017
AFFX-BioC-3_at
1347.50000
P
0.00010
AFFX-BioDn-5_at
1707.00000
P
0.00005
AFFX-BioDn-3_at
9058.00000
P
0.00013
AFFX-CreX-5_at
13305.00000
P
0.00004
AFFX-CreX-3_at
23452.90000
P
0.00004
AFFX-DapX-5_at
10.60000
A
0.47024
AFFX-DapX-M_at
81.60000
A
0.20573
AFFX-DapX-3_at
10.00000
A
0.93232
AFFX-LysX-5_at
4.40000
A
0.73717
AFFX-LysX-M_at
10.10000
A
0.67292
AFFX-LysX-3_at
31.00000
A
0.48511
AFFX-PheX-5_at
8.30000
A
0.93232
AFFX-PheX-M_at
9.00000
A
0.89102
AFFX-PheX-3_at
141.30000
A
0.18513
AFFX-ThrX-5_at
11.00000
A
0.87643
AFFX-ThrX-M_at
68.10000
A
0.32708
22690 701 Kbytes .Supplementary file Size Download File type/resource GSM40060.CEL.gz
3.3 Mb
(ftp) (http) CEL
