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Status
Public on Jan 27, 2006
Title
MGSKO, PR01M006v0
Sample type
RNA
Source name
Anterior tibialis
Organism
Mus musculus Extracted molecule
total RNA
Description
OrganismPart:Muscle;StrainOrLine:C57BL6/129SV; Anterior tibialis removed from 3-month old muscle glycogen synthase WT or knockout mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
proach@iupui.edu Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
704.00000
P
0.00141
AFFX-BioB-M_at
722.60000
P
0.00008
AFFX-BioB-3_at
359.30000
P
0.00125
AFFX-BioC-5_at
1476.50000
P
0.00019
AFFX-BioC-3_at
1165.20000
P
0.00006
AFFX-BioDn-5_at
1628.90000
P
0.00005
AFFX-BioDn-3_at
8434.30000
P
0.00011
AFFX-CreX-5_at
12586.30000
P
0.00004
AFFX-CreX-3_at
24589.70000
P
0.00004
AFFX-DapX-5_at
24.30000
A
0.41138
AFFX-DapX-M_at
16.20000
A
0.54459
AFFX-DapX-3_at
9.00000
A
0.91641
AFFX-LysX-5_at
23.40000
A
0.65934
AFFX-LysX-M_at
58.70000
A
0.26283
AFFX-LysX-3_at
46.00000
A
0.42596
AFFX-PheX-5_at
6.80000
A
0.96632
AFFX-PheX-M_at
5.80000
A
0.94156
AFFX-PheX-3_at
99.70000
A
0.25080
AFFX-ThrX-5_at
12.80000
A
0.92200
AFFX-ThrX-M_at
24.70000
A
0.60308
22690 701 Kbytes .Supplementary file Size Download File type/resource GSM40061.CEL.gz
3.3 Mb
(ftp) (http) CEL
