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Status
Public on Jan 27, 2006
Title
MGSKO, PR01M007v0
Sample type
RNA
Source name
Anterior tibialis
Organism
Mus musculus Extracted molecule
total RNA
Description
OrganismPart:Muscle;StrainOrLine:C57BL6/129SV; Anterior tibialis removed from 3-month old muscle glycogen synthase WT or knockout mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
proach@iupui.edu Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
862.50000
P
0.00159
AFFX-BioB-M_at
966.50000
P
0.00015
AFFX-BioB-3_at
392.20000
P
0.00321
AFFX-BioC-5_at
1767.20000
P
0.00017
AFFX-BioC-3_at
1181.90000
P
0.00022
AFFX-BioDn-5_at
1496.60000
P
0.00004
AFFX-BioDn-3_at
9401.80000
P
0.00011
AFFX-CreX-5_at
14013.60000
P
0.00004
AFFX-CreX-3_at
28489.20000
P
0.00004
AFFX-DapX-5_at
25.10000
A
0.44065
AFFX-DapX-M_at
7.30000
A
0.69939
AFFX-DapX-3_at
11.00000
A
0.89102
AFFX-LysX-5_at
33.10000
A
0.50000
AFFX-LysX-M_at
43.10000
A
0.42596
AFFX-LysX-3_at
40.20000
A
0.20573
AFFX-PheX-5_at
8.80000
A
0.89784
AFFX-PheX-M_at
3.50000
A
0.97154
AFFX-PheX-3_at
182.40000
A
0.15673
AFFX-ThrX-5_at
33.80000
A
0.71226
AFFX-ThrX-M_at
32.80000
A
0.60308
22690 702 Kbytes .Supplementary file Size Download File type/resource GSM40062.CEL.gz
3.3 Mb
(ftp) (http) CEL
