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Status
Public on Jan 27, 2006
Title
MGSKO, PR01M008v0
Sample type
RNA
Source name
Anterior tibialis
Organism
Mus musculus Extracted molecule
total RNA
Description
OrganismPart:Muscle;StrainOrLine:C57BL6/129SV; Anterior tibialis removed from 3-month old muscle glycogen synthase WT or knockout mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
proach@iupui.edu Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
749.70000
P
0.00500
AFFX-BioB-M_at
894.40000
P
0.00019
AFFX-BioB-3_at
337.90000
P
0.01667
AFFX-BioC-5_at
1610.00000
P
0.00045
AFFX-BioC-3_at
1138.00000
P
0.00022
AFFX-BioDn-5_at
1381.30000
P
0.00006
AFFX-BioDn-3_at
9379.70000
P
0.00019
AFFX-CreX-5_at
11858.40000
P
0.00004
AFFX-CreX-3_at
22422.10000
P
0.00004
AFFX-DapX-5_at
43.20000
A
0.21652
AFFX-DapX-M_at
113.40000
A
0.27515
AFFX-DapX-3_at
43.30000
A
0.82467
AFFX-LysX-5_at
6.30000
A
0.81487
AFFX-LysX-M_at
120.60000
A
0.35445
AFFX-LysX-3_at
81.10000
A
0.28774
AFFX-PheX-5_at
8.20000
A
0.94157
AFFX-PheX-M_at
10.90000
A
0.87643
AFFX-PheX-3_at
136.20000
A
0.32708
AFFX-ThrX-5_at
24.20000
A
0.87643
AFFX-ThrX-M_at
60.30000
A
0.52976
22690 702 Kbytes .Supplementary file Size Download File type/resource GSM40063.CEL.gz
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(ftp) (http) CEL
