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Status
Public on Jan 27, 2006
Title
MGSKO, PR02M001v0
Sample type
RNA
Source name
Liver
Organism
Mus musculus Extracted molecule
total RNA
Description
Liver removed from 3-month old muscle glycogen synthase WT or knockout mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 10ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
proach@iupui.edu Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
845.90000
P
0.00159
AFFX-BioB-M_at
1279.80000
P
0.00025
AFFX-BioB-3_at
593.90000
P
0.00029
AFFX-BioC-5_at
1677.10000
P
0.00011
AFFX-BioC-3_at
1258.50000
P
0.00005
AFFX-BioDn-5_at
1611.60000
P
0.00009
AFFX-BioDn-3_at
8752.60000
P
0.00011
AFFX-CreX-5_at
11881.30000
P
0.00004
AFFX-CreX-3_at
24892.60000
P
0.00004
AFFX-DapX-5_at
4.60000
A
0.44064
AFFX-DapX-M_at
33.90000
A
0.50000
AFFX-DapX-3_at
39.40000
A
0.73717
AFFX-LysX-5_at
25.80000
A
0.41138
AFFX-LysX-M_at
12.40000
A
0.64554
AFFX-LysX-3_at
26.10000
A
0.44064
AFFX-PheX-5_at
11.10000
A
0.76093
AFFX-PheX-M_at
7.50000
A
0.95703
AFFX-PheX-3_at
79.50000
A
0.23906
AFFX-ThrX-5_at
29.30000
A
0.61740
AFFX-ThrX-M_at
6.90000
A
0.86863
22690 700 Kbytes .Supplementary file Size Download File type/resource GSM40064.CEL.gz
3.4 Mb
(ftp) (http) CEL
