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Status
Public on Jan 27, 2006
Title
GSL30, PR04M005v0
Sample type
RNA
Source name
medial gastrocnemius
Organism
Mus musculus Extracted molecule
total RNA
Description
Medial gastrocnemius removed from 8-month old muscle glycogen synthase WT or overexpressing mouse. RNA was extracted using GibcoBRL TRIzol Reagent and a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA.
Submission date
Jan 27, 2005
Last update date
May 29, 2005
Contact name
Peter Roach
E-mail(s)
proach@iupui.edu Phone
317-274-1583
Organization name
IU School of Medicine
Department
Street address
City
Indianapolis
State/province
IN
ZIP/Postal code
46202
Country
USA
Platform ID
GPL339 Series (1)
GSE2198 Comparison of transcripts from the anterior tibialis, gastrocnemius, and liver of glycogen synthase WT, GSL30 or KO mice
Data table header descriptions ID_REF
VALUE signal, a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present(P), absent(A), marginal(M), or no call(NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
772.60000
P
0.00359
AFFX-BioB-M_at
1278.30000
P
0.00014
AFFX-BioB-3_at
520.10000
P
0.02611
AFFX-BioC-5_at
2042.00000
P
0.00025
AFFX-BioC-3_at
1266.10000
P
0.00025
AFFX-BioDn-5_at
1097.10000
P
0.00039
AFFX-BioDn-3_at
9966.90000
P
0.00034
AFFX-CreX-5_at
12727.00000
P
0.00004
AFFX-CreX-3_at
24917.40000
P
0.00004
AFFX-DapX-5_at
93.10000
A
0.23906
AFFX-DapX-M_at
93.70000
A
0.27514
AFFX-DapX-3_at
11.40000
A
0.98333
AFFX-LysX-5_at
8.60000
A
0.85206
AFFX-LysX-M_at
105.80000
A
0.27512
AFFX-LysX-3_at
15.80000
A
0.38259
AFFX-PheX-5_at
10.00000
A
0.94580
AFFX-PheX-M_at
10.60000
A
0.88388
AFFX-PheX-3_at
70.90000
A
0.45541
AFFX-ThrX-5_at
15.00000
A
0.89102
AFFX-ThrX-M_at
124.70000
A
0.32707
22690 703 Kbytes .Supplementary file Size Download File type/resource GSM40084.CEL.gz
3.4 Mb
(ftp) (http) CEL
