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Sample GSM401536 Query DataSets for GSM401536
Status Public on May 12, 2009
Title diseased, biological rep3
Sample type RNA
 
Source name Left ventricle
Organism Canis lupus familiaris
Characteristics tissue: heart, left ventricle
age: 7yr
gender: male
breed: Great Dane
Treatment protocol tissue frozen in liq N2 was used
Growth protocol Not applicable
Extracted molecule total RNA
Extraction protocol Qiagen RNEasy with on-column DNAse
Label biotin
Label protocol Std Affymetrix 1 cycle
 
Hybridization protocol Std Affymetrix 1 cycle
Scan protocol Std Affymetrix 1 cycle
Description Gene expression data from DCM tissue
Data processing MAS5&GCRMA
 
Submission date May 11, 2009
Last update date May 11, 2009
Contact name Sridar V Chittur
E-mail(s) schittur@albany.edu
Phone 518-591-7215
Organization name SUNY-University at Albany
Department Center for Functional Genomics
Lab Microarray Core
Street address One Discovery Drive, CRC 342G
City Rensselaer
State/province NY
ZIP/Postal code 12144
Country USA
 
Platform ID GPL3738
Series (1)
GSE16049 Expression in myocardial tissues of Great Dane dogs with cardiomyopathy

Data table header descriptions
ID_REF
VALUE GCRMA normalized signal

Data table
ID_REF VALUE
AFFX-BioB-5_at 0.636961
AFFX-BioB-M_at 0.40887356
AFFX-BioB-3_at 0.4451704
AFFX-BioC-5_at -1.1623449
AFFX-BioC-3_at -1.3088694
AFFX-BioDn-5_at 0.8267517
AFFX-BioDn-3_at 0.52730846
AFFX-CreX-5_at 0.6941328
AFFX-CreX-3_at 0.7022152
AFFX-DapX-5_at 2.3733559
AFFX-DapX-M_at 2.2338114
AFFX-DapX-3_at 2.128108
AFFX-LysX-5_at 2.3781083
AFFX-LysX-M_at 2.0501633
AFFX-LysX-3_at 2.2329192
AFFX-PheX-5_at 3.738187
AFFX-PheX-M_at 3.1360488
AFFX-PheX-3_at 2.2821007
AFFX-ThrX-5_at 2.6422372
AFFX-ThrX-M_at 3.02978

Total number of rows: 43035

Table truncated, full table size 1362 Kbytes.




Supplementary file Size Download File type/resource
GSM401536.CEL.gz 3.6 Mb (ftp)(http) CEL
GSM401536.CHP.gz 233.2 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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