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Sample GSM406259 Query DataSets for GSM406259
Status Public on Oct 12, 2009
Title Retic_0_mut_Rep5
Sample type RNA
 
Source name reticulocyte 0 hour mutant
Organism Mus musculus
Characteristics gender: male
strain: C57BL/6J
cell type: reticulocyte
age: adult
Extracted molecule total RNA
Extraction protocol Total RNA from reticulocyte was extracted and amplified RNA with the RNeasy (Qiagen)Illumina Total Prep RNA Amplification Kits, respectively, following the manufacture's instruction
Label Biotin
Label protocol standard illumina DASL gene expression protocol
 
Hybridization protocol standard illumina DASL gene expression protocol
Scan protocol standard illumina DASL gene expression protocol
Description none
Data processing Raw data was processed through Rosetta Resolver
 
Submission date May 20, 2009
Last update date May 22, 2009
Contact name meng tian
E-mail(s) mengtian@fas.harvard.edu
Phone 6179192263
Organization name Children's Hospital Boston
Department Pathology
Lab Fleming
Street address 320 Longwood Ave Enders1110
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL6885
Series (1)
GSE16174 Reticulocyte 3 timepoints

Data table header descriptions
ID_REF
VALUE signal intensity
0-8.Avg_NBEADS
0-8.BEAD_STDERR
0-8.Detection Pval

Data table
ID_REF VALUE 0-8.Avg_NBEADS 0-8.BEAD_STDERR 0-8.Detection Pval
ILMN_1248788 100.1009 36 3.327601 0.3433584
ILMN_2707227 101.0065 33 3.603994 0.2894737
ILMN_2896528 154.7861 52 4.266541 0
ILMN_2721178 107.7713 44 2.6483 0.07142857
ILMN_1227723 106.9395 41 3.433857 0.08145364
ILMN_3033922 114.5948 52 3.252802 0.01629073
ILMN_3092673 163.4823 40 3.314178 0
ILMN_2730714 250.5218 36 4.965392 0
ILMN_3162224 130.8427 39 4.828238 0.002506266
ILMN_2816356 104.1179 36 4.078474 0.1516291
ILMN_2808939 117.5475 41 4.257398 0.006265664
ILMN_2634564 120.5184 29 4.139904 0.005012531
ILMN_1216623 111.0428 40 3.013253 0.02882206
ILMN_1215157 118.4337 45 2.618835 0.006265664
ILMN_1228777 90.16682 40 2.4328 0.9273183
ILMN_2737647 94.1981 44 2.202248 0.7205514
ILMN_1216425 95.59863 36 3.198122 0.6403509
ILMN_2734484 101.7253 33 3.866176 0.2468672
ILMN_2652961 89.337 39 2.190147 0.943609
ILMN_2952292 93.90973 49 2.367596 0.7318296

Total number of rows: 25697

Table truncated, full table size 1093 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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