NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM406261 Query DataSets for GSM406261
Status Public on Oct 12, 2009
Title Retic_12_mut_Rep2
Sample type RNA
 
Source name reticulocyte 12 hour mutant
Organism Mus musculus
Characteristics gender: male
strain: C57BL/6J
cell type: reticulocyte
age: adult
Extracted molecule total RNA
Extraction protocol Total RNA from reticulocyte was extracted and amplified RNA with the RNeasy (Qiagen)Illumina Total Prep RNA Amplification Kits, respectively, following the manufacture's instruction
Label Biotin
Label protocol standard illumina DASL gene expression protocol
 
Hybridization protocol standard illumina DASL gene expression protocol
Scan protocol standard illumina DASL gene expression protocol
Description none
Data processing Raw data was processed through Rosetta Resolver
 
Submission date May 20, 2009
Last update date May 22, 2009
Contact name meng tian
E-mail(s) mengtian@fas.harvard.edu
Phone 6179192263
Organization name Children's Hospital Boston
Department Pathology
Lab Fleming
Street address 320 Longwood Ave Enders1110
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL6885
Series (1)
GSE16174 Reticulocyte 3 timepoints

Data table header descriptions
ID_REF
VALUE signal intensity
15-5.Avg_NBEADS
15-5.BEAD_STDERR
15-5.Detection Pval

Data table
ID_REF VALUE 15-5.Avg_NBEADS 15-5.BEAD_STDERR 15-5.Detection Pval
ILMN_1248788 105.4782 44 1.636116 0.1278196
ILMN_2707227 102.7267 44 1.340741 0.3609022
ILMN_2896528 150.2517 58 2.587729 0.002506266
ILMN_2721178 117.7612 42 1.936367 0.007518797
ILMN_1227723 110.3426 28 2.684162 0.02506266
ILMN_3033922 116.6711 31 2.189633 0.007518797
ILMN_3092673 155.4385 40 3.429201 0.002506266
ILMN_2730714 208.9999 40 5.081434 0.001253133
ILMN_3162224 126.6459 51 2.344394 0.006265664
ILMN_2816356 98.05157 46 1.595656 0.9010025
ILMN_2808939 113.5314 32 3.016782 0.007518797
ILMN_2634564 113.3603 38 2.159988 0.00877193
ILMN_1216623 117.3205 48 2.049965 0.007518797
ILMN_1215157 122.5366 26 3.153008 0.007518797
ILMN_1228777 102.8421 34 1.315406 0.3446115
ILMN_2737647 102.3616 32 1.705729 0.4085213
ILMN_1216425 107.0092 39 1.937002 0.07769424
ILMN_2734484 102.7219 37 2.126249 0.3621554
ILMN_2652961 100.7412 40 1.288839 0.6278195
ILMN_2952292 104.0266 47 1.456857 0.2368421

Total number of rows: 25697

Table truncated, full table size 1102 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap