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Sample GSM41514

Query DataSets for GSM41514

Status

Public on Oct 04, 2005

Title

SCARKO d 16

Sample type

RNA

Source name

testis

Organism

Mus musculus

Extracted molecule

total RNA

Description

RNA from 1 testis from three 16 day old Sertoli cell-selective androgen receptor knockout (SCARKO) mice. Immediately after removal, testis samples were snap-frozen and stored in liquid nitrogen. Before RNA extraction, testis samples were weighed and homogenized in a Dounce homogenizer. Thereafter RNA was isolated with the QIAGEN RNeasy Kit (Chatsworth, CA) according to the manufacturers instructions, encompassing an on-column DNaseI-treatment of the RNA.
Keywords = SCARKO
Keywords = testis
Keywords = spermatogenesis
Keywords = androgens
Keywords = microarray
Keywords = Pem
Keywords = serine protease inhibitor

Submission date

Feb 09, 2005

Last update date

Mar 18, 2009

Contact name

Rekin's Janky

E-mail(s)

Nucleomics.Bioinformatics@vib.be

Organization name

VIB

Department

Nucleomics Core

Street address

Herestraat 49 Box 816

City

Leuven

ZIP/Postal code

B-3000

Country

Belgium

Platform ID

GPL8321

Series (1)

GSE2259

Testicular gene expression in SCARKO mice during prepuberty

Data table header descriptions
ID_REF
ANALYSIS_NAME	Hybridisation identification
VALUE	Signal
ABS_CALL	Absolute detection call
DETECTION P-VALUE	Detection P-value

Data table
ID_REF	ANALYSIS_NAME	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	hyb896	71.3	P	0.00011
AFFX-BioB-M_at	hyb896	126.3	P	0.000044
AFFX-BioB-3_at	hyb896	79	P	0.000044
AFFX-BioC-5_at	hyb896	156.3	P	0.000044
AFFX-BioC-3_at	hyb896	151.8	P	0.000044
AFFX-BioDn-5_at	hyb896	254.2	P	0.000044
AFFX-BioDn-3_at	hyb896	715.1	P	0.000044
AFFX-CreX-5_at	hyb896	1793	P	0.000044
AFFX-CreX-3_at	hyb896	2199.3	P	0.000044
AFFX-DapX-5_at	hyb896	0.3	A	0.883887
AFFX-DapX-M_at	hyb896	0.5	A	0.749204
AFFX-DapX-3_at	hyb896	1.4	A	0.760937
AFFX-LysX-5_at	hyb896	0.1	A	0.963443
AFFX-LysX-M_at	hyb896	0.3	A	0.724854
AFFX-LysX-3_at	hyb896	1.6	A	0.139462
AFFX-PheX-5_at	hyb896	0.1	A	0.957038
AFFX-PheX-M_at	hyb896	0.1	A	0.921998
AFFX-PheX-3_at	hyb896	2.3	A	0.368438
AFFX-ThrX-5_at	hyb896	0.3	A	0.824672
AFFX-ThrX-M_at	hyb896	0.5	A	0.645547

Total number of rows: 22690

Table truncated, full table size 760 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM41514.CEL.gz	3.4 Mb	(ftp)(http)	CEL