NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM41515 Query DataSets for GSM41515
Status Public on Oct 04, 2005
Title SCARKO d 20
Sample type RNA
 
Source name testis
Organism Mus musculus
Extracted molecule total RNA
 
Description RNA from 1 testis from three 20 day old Sertoli cell-selective androgen receptor knockout (SCARKO) mice. Immediately after removal, testis samples were snap-frozen and stored in liquid nitrogen. Before RNA extraction, testis samples were weighed and homogenized in a Dounce homogenizer. Thereafter RNA was isolated with the QIAGEN RNeasy Kit (Chatsworth, CA) according to the manufacturers instructions, encompassing an on-column DNaseI-treatment of the RNA.
Keywords = SCARKO
Keywords = testis
Keywords = spermatogenesis
Keywords = androgens
Keywords = microarray
Keywords = Pem
Keywords = serine protease inhibitor
 
Submission date Feb 09, 2005
Last update date Mar 18, 2009
Contact name Rekin's Janky
E-mail(s) Nucleomics.Bioinformatics@vib.be
Organization name VIB
Department Nucleomics Core
Street address Herestraat 49 Box 816
City Leuven
ZIP/Postal code B-3000
Country Belgium
 
Platform ID GPL8321
Series (1)
GSE2259 Testicular gene expression in SCARKO mice during prepuberty

Data table header descriptions
ID_REF
ANALYSIS_NAME Hybridisation identification
VALUE Signal
ABS_CALL Absolute detection call
DETECTION P-VALUE Detection P-value

Data table
ID_REF ANALYSIS_NAME VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at hyb897 75.6 P 0.000147
AFFX-BioB-M_at hyb897 136.3 P 0.000044
AFFX-BioB-3_at hyb897 88 P 0.000044
AFFX-BioC-5_at hyb897 154.8 P 0.00006
AFFX-BioC-3_at hyb897 158.3 P 0.000052
AFFX-BioDn-5_at hyb897 255.9 P 0.000044
AFFX-BioDn-3_at hyb897 770.9 P 0.000044
AFFX-CreX-5_at hyb897 1996.8 P 0.000044
AFFX-CreX-3_at hyb897 2512.8 P 0.000044
AFFX-DapX-5_at hyb897 2.4 A 0.250796
AFFX-DapX-M_at hyb897 1.8 A 0.455413
AFFX-DapX-3_at hyb897 0.6 A 0.48511
AFFX-LysX-5_at hyb897 1.6 A 0.396911
AFFX-LysX-M_at hyb897 1.4 A 0.544603
AFFX-LysX-3_at hyb897 3.2 P 0.018281
AFFX-PheX-5_at hyb897 1.3 A 0.5
AFFX-PheX-M_at hyb897 0.2 A 0.984817
AFFX-PheX-3_at hyb897 1.7 A 0.60308
AFFX-ThrX-5_at hyb897 0.4 A 0.804754
AFFX-ThrX-M_at hyb897 2.5 A 0.313723

Total number of rows: 22690

Table truncated, full table size 760 Kbytes.




Supplementary file Size Download File type/resource
GSM41515.CEL.gz 3.3 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap