NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM416545 Query DataSets for GSM416545
Status Public on Jun 01, 2010
Title 3100066_Stroke
Sample type RNA
 
Source name Whole blood RNA
Organism Homo sapiens
Characteristics gender: Female
age: 43
race: Caucasian
Extracted molecule total RNA
Extraction protocol RNA was extracted using the Qiagen Paxgene Blood RNA kit. Hemoglobin reduction was not performed.
Label biotin
Label protocol RNA was amplified using the Illumina TotalPrep RNA amplification kit, resulting in biotin labeled cRNA.
 
Hybridization protocol Standard Illumina hybridizaion protocol
Scan protocol Standard Illumina scanning protocol
Description Stroke
Data processing Robust multiarray analysis normalization was conducted in GeneSpring, resulting in background correction, quantile normalization, and summarization in the log base 2 scale.
 
Submission date Jun 11, 2009
Last update date Jun 11, 2009
Contact name Taura L Barr
E-mail(s) barrt@mail.nih.gov
Phone 301-443-9140
Fax 301-480-1413
Organization name NINR/NIH
Department Tissue Injury Unit
Street address Bldg 10 CRC Room 2-1339
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL6883
Series (1)
GSE16561 Gene expression analysis of peripheral whole blood RNA following ischemic stroke

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1809034 0.11258602
ILMN_1660305 0.45042324
ILMN_1762337 0.080895424
ILMN_2055271 0.25595045
ILMN_1814316 0.20591927
ILMN_2359168 0.27580357
ILMN_1731507 0.1575203
ILMN_1787689 0.02437067
ILMN_1745607 0.12789917
ILMN_2136495 0.23423052
ILMN_1668111 0.06625843
ILMN_2295559 0.10637188
ILMN_1735045 0.17353821
ILMN_1680754 0.033452034
ILMN_2375184 null
ILMN_1659452 0.11579943
ILMN_1767388 0.025034904
ILMN_1675204 0.35742617
ILMN_1673870 0.1517086
ILMN_1755321 -0.16494179

Total number of rows: 24424

Table truncated, full table size 575 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap