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Sample GSM416546 Query DataSets for GSM416546
Status Public on Jun 01, 2010
Title 3100076_Stroke
Sample type RNA
 
Source name Whole blood RNA
Organism Homo sapiens
Characteristics gender: Female
age: 44
race: Caucasian
Extracted molecule total RNA
Extraction protocol RNA was extracted using the Qiagen Paxgene Blood RNA kit. Hemoglobin reduction was not performed.
Label biotin
Label protocol RNA was amplified using the Illumina TotalPrep RNA amplification kit, resulting in biotin labeled cRNA.
 
Hybridization protocol Standard Illumina hybridizaion protocol
Scan protocol Standard Illumina scanning protocol
Description Stroke
Data processing Robust multiarray analysis normalization was conducted in GeneSpring, resulting in background correction, quantile normalization, and summarization in the log base 2 scale.
 
Submission date Jun 11, 2009
Last update date Jun 11, 2009
Contact name Taura L Barr
E-mail(s) barrt@mail.nih.gov
Phone 301-443-9140
Fax 301-480-1413
Organization name NINR/NIH
Department Tissue Injury Unit
Street address Bldg 10 CRC Room 2-1339
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platform ID GPL6883
Series (1)
GSE16561 Gene expression analysis of peripheral whole blood RNA following ischemic stroke

Data table header descriptions
ID_REF
VALUE quantile normalized signal intensity

Data table
ID_REF VALUE
ILMN_1809034 0.03165102
ILMN_1660305 0.03763771
ILMN_1762337 0.17238188
ILMN_2055271 null
ILMN_1814316 0.012996674
ILMN_2359168 0.18398285
ILMN_1731507 0.12916756
ILMN_1787689 0.033290386
ILMN_1745607 0.09280491
ILMN_2136495 -0.016820908
ILMN_1668111 -0.018146992
ILMN_2295559 0.13949919
ILMN_1735045 0.029242039
ILMN_1680754 0.12992144
ILMN_2375184 0.0425148
ILMN_1659452 0.06313467
ILMN_1767388 null
ILMN_1675204 0.008672237
ILMN_1673870 0.22025347
ILMN_1755321 -0.31052065

Total number of rows: 24424

Table truncated, full table size 577 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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