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Sample GSM419927 Query DataSets for GSM419927
Status Public on Jun 23, 2010
Title RAW 264.7, RANKL + M-CSF
Sample type RNA
 
Source name RAW 264.7, RANKL + M-CSF
Organism Mus musculus
Characteristics cell line: RAW 264.7
Extracted molecule total RNA
Extraction protocol RNeasy (Qiagen)
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol for the Mouse 1.0ST arrays from 100ng total RNA.
 
Hybridization protocol As per standard Affymetrix protocol for the Mouse 1.0ST arrays.
Scan protocol Arrays were scanned on a DNA microarray Agilent Scanner
Description osteoclast differentiation of RAW 264.7 transfected with control vector
Data processing Quantile normalisation and Robust Multichip Average (RMA) background correction adjusting for probe sequence (Partek Software) was used to generate gene expression levels from the Mouse Gene 1.0ST arrays.
 
Submission date Jun 23, 2009
Last update date Jun 25, 2009
Contact name Omer Barad
E-mail(s) omer.barad@weizmann.ac.il
Organization name Weizmann Institute of Science
Street address Herzel
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platform ID GPL6246
Series (1)
GSE16749 miR-155 role in osteoclast differentiation

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
10338001 12.2206
10338002 6.99411
10338003 10.8695
10338004 10.0736
10338005 2.68565
10338006 2.97658
10338007 3.34247
10338008 3.93983
10338009 9.57648
10338010 2.74461
10338011 6.25572
10338012 2.86122
10338013 2.55316
10338014 2.61177
10338015 2.62005
10338016 8.51888
10338017 13.4156
10338018 7.50959
10338019 5.60881
10338020 9.50141

Total number of rows: 35557

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM419927.CEL.gz 3.9 Mb (ftp)(http) CEL
GSM419927.CHP.gz 269.5 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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