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Sample GSM419929 Query DataSets for GSM419929
Status Public on Jun 23, 2010
Title RAW 264.7, RANKL + M-CSF, miR-155
Sample type RNA
 
Source name RAW 264.7, RANKL + M-CSF, miR-155
Organism Mus musculus
Characteristics cell line: RAW 264.7
Extracted molecule total RNA
Extraction protocol RNeasy (Qiagen)
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol for the Mouse 1.0ST arrays from 100ng total RNA.
 
Hybridization protocol As per standard Affymetrix protocol for the Mouse 1.0ST arrays.
Scan protocol Arrays were scanned on a DNA microarray Agilent Scanner
Description osteoclast differentiation of RAW 264.7 transfected with miR-155 expressing vector
Data processing Quantile normalisation and Robust Multichip Average (RMA) background correction adjusting for probe sequence (Partek Software) was used to generate gene expression levels from the Mouse Gene 1.0ST arrays.
 
Submission date Jun 23, 2009
Last update date Jun 25, 2009
Contact name Omer Barad
E-mail(s) omer.barad@weizmann.ac.il
Organization name Weizmann Institute of Science
Street address Herzel
City Rehovot
ZIP/Postal code 76100
Country Israel
 
Platform ID GPL6246
Series (1)
GSE16749 miR-155 role in osteoclast differentiation

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
10338001 12.4557
10338002 6.98096
10338003 11.0897
10338004 10.1608
10338005 2.63259
10338006 2.9122
10338007 3.24165
10338008 3.8794
10338009 9.4519
10338010 2.70337
10338011 6.12808
10338012 2.7531
10338013 2.49331
10338014 2.55709
10338015 2.52305
10338016 8.49054
10338017 13.4413
10338018 7.55608
10338019 5.51519
10338020 9.44424

Total number of rows: 35557

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM419929.CEL.gz 3.9 Mb (ftp)(http) CEL
GSM419929.CHP.gz 269.6 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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