 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Dec 04, 2019 |
| Title |
PRSS53-2 |
| Sample type |
SRA |
| |
|
| Source name |
rabbit skin
|
| Organism |
Oryctolagus cuniculus |
| Characteristics |
tissue: skin
age: 30 days
genotype: Prss53-/-
|
| Treatment protocol |
Crispr/Cas9
|
| Growth protocol |
All rabbit experiments were conducted under the approval of the Animal Care Center and Use Committee of Jilin University. The rabbits were housed under standard laboratory conditions of a 12-h light and 12-h dark cycle in individual cages and were fed twice a day with commercial rabbit basic diet (Animal center of Jilin University) and water ad libitum.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Skin were removed, flash frozen on dry ice, and RNA was harvested using Trizol reagent.
NEBNext Ultra RNA library Prep Kit for Illumina
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Data processing |
Basecalls performed using Bcl2fastq (v2.17.1.14)
Filter Dataset using Cutadapt（version 1.9.1）
|
| |
|
| Submission date |
Dec 03, 2019 |
| Last update date |
Dec 05, 2019 |
| Contact name |
CNSA CNGBdb |
| E-mail(s) |
datasubs@cngb.org
|
| Organization name |
CNGB
|
| Street address |
Jinsha Road
|
| City |
Shenzhen |
| State/province |
Guangdong |
| ZIP/Postal code |
518000 |
| Country |
China |
| |
|
| Platform ID |
GPL26786 |
| Series (1) |
| GSE141384 |
A direct link between Prss53, hair curvature, and skeletal dysplasia |
|
| Relations |
| BioSample |
SAMN13473201 |
| SRA |
SRX7262700 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSM4202151_PRSS53-2.anno.fpkm.xls.gz |
991.2 Kb |
(ftp)(http) |
XLS |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
|
|
|
|
 |
