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Sample GSM437728 Query DataSets for GSM437728
Status Public on Jan 13, 2010
Title Raji 50 ng rep1
Sample type RNA
 
Source name Burkitts Lymphoma (Raji) Total RNA (Ambion Cat# AM7876)
Organism Homo sapiens
Characteristics cell type: Burkitts Lymphoma (Raji)
input: 50 ng
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
Raji 50 ng rep1.Avg_NBEADS
Raji 50 ng rep1.BEAD_STDERR
Raji 50 ng rep1.Detection Pval

Data table
ID_REF VALUE Raji 50 ng rep1.Avg_NBEADS Raji 50 ng rep1.BEAD_STDERR Raji 50 ng rep1.Detection Pval
ILMN_1762337 1338.838 67 65.79586 0
ILMN_2055271 210.7162 36 11.15225 0.02265372
ILMN_2383229 55.56076 30 6.161217 0.184466
ILMN_1806310 45.79184 37 4.991333 0.3624595
ILMN_1779670 43.84684 46 4.598559 0.4271845
ILMN_2321282 73.58045 34 7.109246 0.09061489
ILMN_1772582 150.3482 45 6.600184 0.03559871
ILMN_1717783 30.42011 36 5.362441 0.8252427
ILMN_1814316 1670.719 37 93.63474 0
ILMN_2359168 1630.243 38 98.06521 0
ILMN_1731507 139.326 37 7.395511 0.03559871
ILMN_1787689 70.2468 35 5.433178 0.1132686
ILMN_1745607 36.11117 36 7.731153 0.6440129
ILMN_2136495 44.44658 29 8.088716 0.407767
ILMN_1668111 32.95415 31 8.749048 0.7443365
ILMN_2295559 47.48817 45 5.665359 0.3171521
ILMN_1735045 949.8171 45 52.60121 0
ILMN_1680754 42.79515 26 8.030192 0.4466019
ILMN_2375184 47.378 43 6.488886 0.3203883
ILMN_1659452 61.02793 50 5.493359 0.1391586

Total number of rows: 24526

Table truncated, full table size 957 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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