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Sample GSM437729 Query DataSets for GSM437729
Status Public on Jan 13, 2010
Title Raji 50 ng rep2
Sample type RNA
 
Source name Burkitts Lymphoma (Raji) Total RNA (Ambion Cat# AM7876)
Organism Homo sapiens
Characteristics cell type: Burkitts Lymphoma (Raji)
input: 50 ng
Extracted molecule total RNA
Extraction protocol Ambion extraction protocol
Label Cy3
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing Raw data was analyzed using GenomeStudio v1.1
 
Submission date Aug 07, 2009
Last update date Jan 13, 2010
Contact name Craig April
E-mail(s) capril@illumina.com
Organization name Illumina, Inc.
Street address 9885 Towne Centre Drive
City San Diego
State/province CA
ZIP/Postal code 92121-1975
Country USA
 
Platform ID GPL6883
Series (2)
GSE17565 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples - dilution series
GSE17599 Whole-Genome Gene Expression Profiling of Formalin-Fixed, Paraffin-Embedded Tissue Samples

Data table header descriptions
ID_REF
VALUE quantile normalized
Raji 50 ng rep2.Avg_NBEADS
Raji 50 ng rep2.BEAD_STDERR
Raji 50 ng rep2.Detection Pval

Data table
ID_REF VALUE Raji 50 ng rep2.Avg_NBEADS Raji 50 ng rep2.BEAD_STDERR Raji 50 ng rep2.Detection Pval
ILMN_1762337 1449.775 58 68.14569 0
ILMN_2055271 210.6019 41 11.87555 0.02265372
ILMN_2383229 57.65509 31 5.604782 0.1618123
ILMN_1806310 44.06998 47 6.557661 0.3980583
ILMN_1779670 40.04033 48 6.876057 0.5275081
ILMN_2321282 109.2113 41 7.504217 0.05177994
ILMN_1772582 171.1135 43 8.28024 0.03236246
ILMN_1717783 54.34707 32 6.44162 0.184466
ILMN_1814316 1810.495 41 112.0325 0
ILMN_2359168 1491.648 37 80.66295 0
ILMN_1731507 98.21271 40 6.163284 0.05501618
ILMN_1787689 68.47659 36 6.879023 0.1100324
ILMN_1745607 33.23359 39 6.9075 0.7799353
ILMN_2136495 31.86433 35 6.419584 0.8381877
ILMN_1668111 39.09861 45 6.787918 0.5501618
ILMN_2295559 33.11124 59 5.118797 0.7799353
ILMN_1735045 1151.112 42 81.42677 0
ILMN_1680754 52.02639 32 7.813029 0.2168285
ILMN_2375184 54.20381 33 7.590152 0.184466
ILMN_1659452 56.68443 43 4.020998 0.1650485

Total number of rows: 24526

Table truncated, full table size 955 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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